Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFI49929.1 | SFI49946.1 | SAMN04487775_10255 | SAMN04487775_10256 | Hypothetical protein. | Flagellar hook-associated protein 1 FlgK. | 0.773 |
| SFI49929.1 | SFI49961.1 | SAMN04487775_10255 | SAMN04487775_10257 | Hypothetical protein. | Flagellar hook-associated protein 3 FlgL. | 0.545 |
| SFI49929.1 | csrA | SAMN04487775_10255 | SAMN04487775_10259 | Hypothetical protein. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.484 |
| SFI49929.1 | fliW | SAMN04487775_10255 | SAMN04487775_10258 | Hypothetical protein. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.484 |
| SFI49946.1 | SFI49929.1 | SAMN04487775_10256 | SAMN04487775_10255 | Flagellar hook-associated protein 1 FlgK. | Hypothetical protein. | 0.773 |
| SFI49946.1 | SFI49961.1 | SAMN04487775_10256 | SAMN04487775_10257 | Flagellar hook-associated protein 1 FlgK. | Flagellar hook-associated protein 3 FlgL. | 0.988 |
| SFI49946.1 | csrA | SAMN04487775_10256 | SAMN04487775_10259 | Flagellar hook-associated protein 1 FlgK. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.842 |
| SFI49946.1 | fliW | SAMN04487775_10256 | SAMN04487775_10258 | Flagellar hook-associated protein 1 FlgK. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.934 |
| SFI49961.1 | SFI49929.1 | SAMN04487775_10257 | SAMN04487775_10255 | Flagellar hook-associated protein 3 FlgL. | Hypothetical protein. | 0.545 |
| SFI49961.1 | SFI49946.1 | SAMN04487775_10257 | SAMN04487775_10256 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 1 FlgK. | 0.988 |
| SFI49961.1 | csrA | SAMN04487775_10257 | SAMN04487775_10259 | Flagellar hook-associated protein 3 FlgL. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.869 |
| SFI49961.1 | fliW | SAMN04487775_10257 | SAMN04487775_10258 | Flagellar hook-associated protein 3 FlgL. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.986 |
| csrA | SFI49929.1 | SAMN04487775_10259 | SAMN04487775_10255 | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Hypothetical protein. | 0.484 |
| csrA | SFI49946.1 | SAMN04487775_10259 | SAMN04487775_10256 | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar hook-associated protein 1 FlgK. | 0.842 |
| csrA | SFI49961.1 | SAMN04487775_10259 | SAMN04487775_10257 | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar hook-associated protein 3 FlgL. | 0.869 |
| csrA | fliW | SAMN04487775_10259 | SAMN04487775_10258 | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.999 |
| fliW | SFI49929.1 | SAMN04487775_10258 | SAMN04487775_10255 | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Hypothetical protein. | 0.484 |
| fliW | SFI49946.1 | SAMN04487775_10258 | SAMN04487775_10256 | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Flagellar hook-associated protein 1 FlgK. | 0.934 |
| fliW | SFI49961.1 | SAMN04487775_10258 | SAMN04487775_10257 | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Flagellar hook-associated protein 3 FlgL. | 0.986 |
| fliW | csrA | SAMN04487775_10258 | SAMN04487775_10259 | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.999 |