STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI63684.1Membrane protease subunit HflK; HflC and HflK could encode or regulate a protease. (320 aa)    
Predicted Functional Partners:
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.976
SFI63703.1
Membrane protease subunit HflC; HflC and HflK could regulate a protease.
 
   
 0.955
SFJ04147.1
Zinc protease.
  
 0.706
SFI74187.1
Membrane associated serine protease, rhomboid family.
   
 0.654
SFI99906.1
Membrane associated serine protease, rhomboid family.
   
 0.654
SFI76482.1
Cell division protease FtsH; Belongs to the AAA ATPase family.
   
 
 0.652
SFI66193.1
Uridine kinase.
  
  0.588
SFJ09689.1
Membrane protein implicated in regulation of membrane protease activity.
 
  
 0.579
SFI63664.1
Protein of unknown function.
       0.536
SFI82723.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
  0.536
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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