STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI66268.1Zinc transport system substrate-binding protein. (351 aa)    
Predicted Functional Partners:
SFJ01567.1
Zinc transport system ATP-binding protein.
 
 
 0.985
SFJ01540.1
Zinc transport system permease protein.
 
 
 0.981
SFJ03711.1
Zinc transport system permease protein.
 
 
 0.966
SFI66307.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
 
  
 0.833
SFJ04403.1
GTPase, G3E family.
  
  
 0.795
SFJ01525.1
Hypothetical protein.
 
     0.793
rpsZ
Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.748
SFJ02022.1
Iron (metal) dependent repressor, DtxR family.
 
 
 0.745
rpmB
Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.736
SFI66292.1
Hypothetical protein.
       0.548
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.