Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI38438.1 | SFI43052.1 | SAMN04487775_10133 | SAMN04487775_101327 | Diguanylate cyclase (GGDEF) domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.684 |
SFI38438.1 | SFI54525.1 | SAMN04487775_10133 | SAMN04487775_102299 | Diguanylate cyclase (GGDEF) domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.997 |
SFI38438.1 | SFI54566.1 | SAMN04487775_10133 | SAMN04487775_102301 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.999 |
SFI38438.1 | SFI68562.1 | SAMN04487775_10133 | SAMN04487775_104126 | Diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.978 |
SFI38438.1 | SFI68611.1 | SAMN04487775_10133 | SAMN04487775_104128 | Diguanylate cyclase (GGDEF) domain-containing protein. | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.697 |
SFI38438.1 | SFI68629.1 | SAMN04487775_10133 | SAMN04487775_104129 | Diguanylate cyclase (GGDEF) domain-containing protein. | sigma-B regulation protein RsbU (phosphoserine phosphatase). | 0.940 |
SFI38438.1 | SFI76119.1 | SAMN04487775_10133 | SAMN04487775_105176 | Diguanylate cyclase (GGDEF) domain-containing protein. | Anti-anti-sigma factor. | 0.697 |
SFI38438.1 | SFI81216.1 | SAMN04487775_10133 | SAMN04487775_106122 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SFI38438.1 | SFI92042.1 | SAMN04487775_10133 | SAMN04487775_10850 | Diguanylate cyclase (GGDEF) domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.997 |
SFI38438.1 | SFI92884.1 | SAMN04487775_10133 | SAMN04487775_10896 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SFI43052.1 | SFI38438.1 | SAMN04487775_101327 | SAMN04487775_10133 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.684 |
SFI43052.1 | SFI54525.1 | SAMN04487775_101327 | SAMN04487775_102299 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | His Kinase A (phospho-acceptor) domain-containing protein. | 0.834 |
SFI43052.1 | SFI54566.1 | SAMN04487775_101327 | SAMN04487775_102301 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.848 |
SFI43052.1 | SFI68562.1 | SAMN04487775_101327 | SAMN04487775_104126 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.963 |
SFI43052.1 | SFI68611.1 | SAMN04487775_101327 | SAMN04487775_104128 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.967 |
SFI43052.1 | SFI68629.1 | SAMN04487775_101327 | SAMN04487775_104129 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | sigma-B regulation protein RsbU (phosphoserine phosphatase). | 0.944 |
SFI43052.1 | SFI76119.1 | SAMN04487775_101327 | SAMN04487775_105176 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma factor. | 0.979 |
SFI43052.1 | SFI81216.1 | SAMN04487775_101327 | SAMN04487775_106122 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.921 |
SFI43052.1 | SFI92042.1 | SAMN04487775_101327 | SAMN04487775_10850 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | His Kinase A (phospho-acceptor) domain-containing protein. | 0.663 |
SFI43052.1 | SFI92884.1 | SAMN04487775_101327 | SAMN04487775_10896 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.880 |
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