STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI78950.1Uncharacterized conserved protein, DUF1015 family. (444 aa)    
Predicted Functional Partners:
SFI63211.1
NADPH-dependent glutamate synthase beta chain.
    
  0.793
SFI43718.1
Glutamine synthetase.
  
  
  0.567
SFI78972.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
       0.561
SFI78929.1
Transposase and inactivated derivatives.
       0.545
SFI74558.1
Alpha amylase, catalytic domain.
  
     0.475
SFJ01285.1
Hypothetical protein.
  
     0.470
SFI44779.1
Putative hydrolase of the HAD superfamily.
 
  
  0.457
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.450
SFI66193.1
Uridine kinase.
    
  0.442
SFI82234.1
Putative hydrolase of the HAD superfamily.
 
  
  0.441
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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