STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ01719.1Predicted O-methyltransferase YrrM. (192 aa)    
Predicted Functional Partners:
SFJ01754.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
       0.791
SFJ01741.1
Prephenate dehydrogenase.
       0.779
SFI37955.1
Hypothetical protein.
  
  
 0.704
SFI74775.1
Putative protease.
  
  
 0.704
SFJ04914.1
Putative protease.
  
  
 0.704
SFJ09142.1
Putative protease.
  
  
 0.704
SFI66193.1
Uridine kinase.
 
    0.577
SFJ01696.1
Methyl-accepting chemotaxis protein.
       0.551
tsaD
N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
    0.508
SFI45258.1
16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
    0.493
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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