STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ09034.1Hypothetical protein. (1290 aa)    
Predicted Functional Partners:
SFJ09065.1
Dolichol kinase.
 
     0.933
SFJ09022.1
Hypothetical protein.
 
     0.908
SFI43532.1
Hypothetical protein.
  
 
 
 0.882
SFI50756.1
FecR family protein.
  
 
 
 0.863
SFI63803.1
FecR family protein.
  
 
 
 0.863
SFI53991.1
P83/100 protein.
 
    0.834
SFI54525.1
His Kinase A (phospho-acceptor) domain-containing protein.
     
 0.829
SFI81216.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.825
SFI69316.1
Flagellar protein FlbB.
  
   
 0.813
SFI66840.1
HEAT repeat-containing protein.
 
    0.809
Your Current Organism:
Treponema bryantii
NCBI taxonomy Id: 163
Other names: ATCC 33254, T. bryantii, strain RUS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.