STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI59782.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
SEI59924.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 0.999
SEI59951.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 0.999
SEI59899.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.996
SEI88451.1
Spermidine/putrescine transport system permease protein.
  
 0.947
SEI59974.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
 0.945
SEJ22990.1
Multiple sugar transport system substrate-binding protein.
 
 0.942
SEI88421.1
Spermidine/putrescine transport system permease protein.
  
 0.832
SEI59424.1
PTS system, sucrose-specific IIC component.
   
 
 0.749
SEI55050.1
PTS system, glucose-specific IIC component.
   
 
 0.749
SEJ29941.1
PTS system, D-glucosamine-specific IIC component.
   
 
 0.749
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.