STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI61467.1Oligopeptide transport system permease protein. (308 aa)    
Predicted Functional Partners:
SEI61445.1
Oligopeptide transport system permease protein.
 
 0.999
SEI61498.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
SEI61523.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
SEI61418.1
Oligopeptide transport system substrate-binding protein.
 
 0.987
SEI61385.1
Oligopeptide transport system substrate-binding protein.
 
 0.980
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 
  0.920
SEI59546.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
    
 0.901
SEJ05281.1
Polar amino acid transport system ATP-binding protein.
 
    
 0.901
SEI70655.1
Putative ABC transport system ATP-binding protein.
 
 
    0.897
SEJ12415.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
    
 0.871
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.