STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI77795.1Type II secretion system (T2SS), protein M. (197 aa)    
Predicted Functional Partners:
SEI77850.1
Hypothetical protein.
       0.794
SEI77874.1
Type IV pilus assembly protein PilC.
       0.777
SEI77820.1
Hypothetical protein.
       0.773
SEI77731.1
Type IV pilus assembly protein PilB.
       0.724
SEI77707.1
Twitching motility protein PilT.
       0.714
SEI77759.1
Hypothetical protein.
       0.714
SEI77928.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
       0.545
SEI77904.1
Hypothetical protein.
       0.508
SEI77954.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.504
SEI77979.1
Hypothetical protein.
       0.504
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.