Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI75094.1 | SEI75120.1 | SAMN05216514_10342 | SAMN05216514_10343 | Hypothetical protein. | RNA-binding protein. | 0.898 |
SEI75094.1 | SEI75231.1 | SAMN05216514_10342 | SAMN05216514_10346 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.849 |
SEI75094.1 | SEI75274.1 | SAMN05216514_10342 | SAMN05216514_10347 | Hypothetical protein. | Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.811 |
SEI75094.1 | SEI75305.1 | SAMN05216514_10342 | SAMN05216514_10348 | Hypothetical protein. | Putative protease. | 0.780 |
SEI75094.1 | SEI75339.1 | SAMN05216514_10342 | SAMN05216514_10349 | Hypothetical protein. | Helix-turn-helix. | 0.538 |
SEI75094.1 | nadD | SAMN05216514_10342 | SAMN05216514_10344 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.916 |
SEI75094.1 | parC | SAMN05216514_10342 | SAMN05216514_10341 | Hypothetical protein. | Topoisomerase-4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. | 0.587 |
SEI75094.1 | parE | SAMN05216514_10342 | SAMN05216514_10340 | Hypothetical protein. | DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.600 |
SEI75094.1 | rsfS | SAMN05216514_10342 | SAMN05216514_10345 | Hypothetical protein. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.981 |
SEI75120.1 | SEI75094.1 | SAMN05216514_10343 | SAMN05216514_10342 | RNA-binding protein. | Hypothetical protein. | 0.898 |
SEI75120.1 | SEI75231.1 | SAMN05216514_10343 | SAMN05216514_10346 | RNA-binding protein. | Methyltransferase domain-containing protein. | 0.889 |
SEI75120.1 | SEI75274.1 | SAMN05216514_10343 | SAMN05216514_10347 | RNA-binding protein. | Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.820 |
SEI75120.1 | SEI75305.1 | SAMN05216514_10343 | SAMN05216514_10348 | RNA-binding protein. | Putative protease. | 0.777 |
SEI75120.1 | SEI75339.1 | SAMN05216514_10343 | SAMN05216514_10349 | RNA-binding protein. | Helix-turn-helix. | 0.553 |
SEI75120.1 | nadD | SAMN05216514_10343 | SAMN05216514_10344 | RNA-binding protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.994 |
SEI75120.1 | parC | SAMN05216514_10343 | SAMN05216514_10341 | RNA-binding protein. | Topoisomerase-4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. | 0.585 |
SEI75120.1 | parE | SAMN05216514_10343 | SAMN05216514_10340 | RNA-binding protein. | DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.581 |
SEI75120.1 | rsfS | SAMN05216514_10343 | SAMN05216514_10345 | RNA-binding protein. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.901 |
SEI75231.1 | SEI75094.1 | SAMN05216514_10346 | SAMN05216514_10342 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.849 |
SEI75231.1 | SEI75120.1 | SAMN05216514_10346 | SAMN05216514_10343 | Methyltransferase domain-containing protein. | RNA-binding protein. | 0.889 |
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