SEI74109.1 protein (Kandleria vitulina) - STRING interaction network

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Score

SEI74109.1

RNA-binding protein YlmH, contains S4-like domain. (248 aa)

Predicted Functional Partners:

sepF

0.938

prfB

0.805

SEI74139.1

0.799

rplI

0.795

rplS

0.773

rplU

0.771

mrnC

0.771

rpmF

0.771

rplT

0.744

rpmA

0.744

Your Current Organism:

Kandleria vitulina

NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEI74109.1	SEI74139.1	SAMN05216514_1036	SAMN05216514_1037	RNA-binding protein YlmH, contains S4-like domain.	DivIVA protein.	0.799
SEI74109.1	mrnC	SAMN05216514_1036	SAMN05216514_10879	RNA-binding protein YlmH, contains S4-like domain.	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.771
SEI74109.1	prfB	SAMN05216514_1036	SAMN05216514_10447	RNA-binding protein YlmH, contains S4-like domain.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.805
SEI74109.1	rplI	SAMN05216514_1036	SAMN05216514_11150	RNA-binding protein YlmH, contains S4-like domain.	LSU ribosomal protein L9P; Binds to the 23S rRNA.	0.795
SEI74109.1	rplS	SAMN05216514_1036	SAMN05216514_10242	RNA-binding protein YlmH, contains S4-like domain.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.773
SEI74109.1	rplT	SAMN05216514_1036	SAMN05216514_102172	RNA-binding protein YlmH, contains S4-like domain.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.744
SEI74109.1	rplU	SAMN05216514_1036	SAMN05216514_10231	RNA-binding protein YlmH, contains S4-like domain.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.771
SEI74109.1	rpmA	SAMN05216514_1036	SAMN05216514_10229	RNA-binding protein YlmH, contains S4-like domain.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.744
SEI74109.1	rpmF	SAMN05216514_1036	SAMN05216514_11547	RNA-binding protein YlmH, contains S4-like domain.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.771
SEI74109.1	sepF	SAMN05216514_1036	SAMN05216514_1035	RNA-binding protein YlmH, contains S4-like domain.	Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.	0.938
SEI74139.1	SEI74109.1	SAMN05216514_1037	SAMN05216514_1036	DivIVA protein.	RNA-binding protein YlmH, contains S4-like domain.	0.799
SEI74139.1	sepF	SAMN05216514_1037	SAMN05216514_1035	DivIVA protein.	Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.	0.882
mrnC	SEI74109.1	SAMN05216514_10879	SAMN05216514_1036	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	RNA-binding protein YlmH, contains S4-like domain.	0.771
mrnC	rplS	SAMN05216514_10879	SAMN05216514_10242	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.731
mrnC	rplT	SAMN05216514_10879	SAMN05216514_102172	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.729
mrnC	rplU	SAMN05216514_10879	SAMN05216514_10231	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.754
mrnC	rpmA	SAMN05216514_10879	SAMN05216514_10229	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.754
mrnC	rpmF	SAMN05216514_10879	SAMN05216514_11547	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.729
mrnC	sepF	SAMN05216514_10879	SAMN05216514_1035	Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.	0.612
prfB	SEI74109.1	SAMN05216514_10447	SAMN05216514_1036	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	RNA-binding protein YlmH, contains S4-like domain.	0.805