STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI76033.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (134 aa)    
Predicted Functional Partners:
SEI76063.1
Competence protein ComGC.
       0.782
SEI76087.1
Type II secretory pathway, component PulF.
  
  
 0.782
SEI76111.1
Competence protein ComGA.
     
 0.780
SEI76005.1
Hypothetical protein.
       0.773
SEI75955.1
Hypothetical protein.
       0.628
SEI75982.1
Putative Competence protein ComGF.
       0.628
SEJ31532.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 
 0.622
SEI78002.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.494
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.492
SEI76141.1
Protein of unknown function.
       0.454
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.