STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI94493.1LPXTG-motif cell wall anchor domain-containing protein/fibro-slime domain-containing protein. (1234 aa)    
Predicted Functional Partners:
SEI94570.1
Sortase A.
 
  
  0.865
SEI94601.1
Sortase A.
 
  
  0.858
SEI94755.1
Sortase A.
 
  
  0.802
SEI94781.1
Sortase A.
 
  
  0.793
SEI68041.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.718
SEI94541.1
LPXTG-motif cell wall anchor domain-containing protein.
 
    
0.691
SEI98163.1
Cna protein B-type domain-containing protein.
  
     0.542
SEI94631.1
Pilin backbone subunit 3, Cna-B-like domain.
 
     0.535
SEI98187.1
Collagen binding domain-containing protein.
  
     0.508
SEI94666.1
Sortase A.
    
  0.494
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.