STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ03104.1Signal transduction histidine kinase. (434 aa)    
Predicted Functional Partners:
SEJ03004.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.979
SEI85410.1
Chemotaxis protein methyltransferase CheR/two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.954
SEJ34774.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.942
SEJ29986.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.936
SEJ01132.1
Signal transduction histidine kinase.
 
 0.929
SEI93741.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.914
SEI58555.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.912
SEI75544.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.912
SEI89747.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.911
SEI66246.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.909
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.