STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ10802.1Hypothetical protein. (556 aa)    
Predicted Functional Partners:
SEJ10775.1
Dynamin family protein.
   
   0.812
SEJ10828.1
Hypothetical protein.
       0.773
SEI69586.1
Hypothetical protein.
    
 
 0.629
rpsK
SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
  0.590
SEJ22265.1
Nucleoside diphosphate kinase.
   
 
 0.539
SEJ15948.1
Bacteriocin transport accessory protein, putative.
    
  0.476
SEJ31173.1
Hypothetical protein.
    
  0.476
SEJ36470.1
Small redox-active disulfide protein 2.
    
  0.476
SEJ00994.1
Superfamily II DNA or RNA helicase, SNF2 family.
    
   0.456
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.