STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ12387.1Amino acid ABC transporter membrane protein 2, PAAT family. (224 aa)    
Predicted Functional Partners:
SEJ12441.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.997
SEJ12415.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.986
SEJ12360.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  
 
0.980
SEI59569.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.961
SEI59546.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.925
SEJ05281.1
Polar amino acid transport system ATP-binding protein.
 
  0.922
SEI66358.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.920
SEJ05160.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.916
SEJ05242.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.853
SEI66383.1
Polar amino acid transport system substrate-binding protein.
 
0.751
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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