Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI56128.1 | SEJ17457.1 | SAMN05216514_10169 | SAMN05216514_1135 | Homocysteine S-methyltransferase. | GAF domain-containing protein. | 0.529 |
SEI83002.1 | SEJ17457.1 | SAMN05216514_10485 | SAMN05216514_1135 | Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | GAF domain-containing protein. | 0.607 |
SEJ01539.1 | SEJ17457.1 | SAMN05216514_10839 | SAMN05216514_1135 | Putative two-component system response regulator. | GAF domain-containing protein. | 0.698 |
SEJ17457.1 | SEI56128.1 | SAMN05216514_1135 | SAMN05216514_10169 | GAF domain-containing protein. | Homocysteine S-methyltransferase. | 0.529 |
SEJ17457.1 | SEI83002.1 | SAMN05216514_1135 | SAMN05216514_10485 | GAF domain-containing protein. | Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.607 |
SEJ17457.1 | SEJ01539.1 | SAMN05216514_1135 | SAMN05216514_10839 | GAF domain-containing protein. | Putative two-component system response regulator. | 0.698 |
SEJ17457.1 | metAA | SAMN05216514_1135 | SAMN05216514_1136 | GAF domain-containing protein. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.534 |
metAA | SEJ17457.1 | SAMN05216514_1136 | SAMN05216514_1135 | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | GAF domain-containing protein. | 0.534 |