STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ28076.1Helicase-exonuclease AddAB, AddA subunit; ATP-dependent DNA helicase. (1170 aa)    
Predicted Functional Partners:
SEJ28099.1
PD-(D/E)XK nuclease superfamily protein.
 
 
 0.998
recD2
Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
  
 
 0.828
SEJ06838.1
MobA/MobL family protein.
  
 
 0.824
SEJ28044.1
Arsenate reductase; Belongs to the ArsC family.
       0.777
SEI93547.1
Protein involved in sex pheromone biosynthesis.
  
     0.657
SEI93485.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
 
 
0.646
SEI80958.1
HRDC domain-containing protein.
    
 0.639
SEJ22345.1
Exonuclease.
 
 
 0.624
SEJ05358.1
Exonuclease RecJ.
 
   
 0.611
SEI89206.1
Stage V sporulation protein B.
  
     0.589
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.