STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ27808.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (293 aa)    
Predicted Functional Partners:
SEI59424.1
PTS system, sucrose-specific IIC component.
  
 0.991
SEI55050.1
PTS system, glucose-specific IIC component.
  
 0.991
SEJ29941.1
PTS system, D-glucosamine-specific IIC component.
  
 0.991
SEJ14011.1
PTS system, maltose and glucose-specific IIC component.
  
 0.974
SEJ04759.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
    
 0.906
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.834
SEI82803.1
PTS system, mannose-specific IIB component.
    
 0.814
SEI70771.1
Fructan beta-fructosidase.
  
 
 0.766
SEI76530.1
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.702
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 
 0.604
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.