STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ28861.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
SEJ28886.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
       0.773
SEJ28916.1
Hypothetical protein.
       0.773
SEJ28934.1
Hypothetical protein.
       0.762
SEJ28834.1
Hypothetical protein.
       0.574
SEJ28958.1
Sensor histidine kinase YesM.
       0.500
SEJ28982.1
Two component transcriptional regulator, LytTR family.
       0.500
SEJ28812.1
ABC transporter transmembrane region.
       0.457
Your Current Organism:
Kandleria vitulina
NCBI taxonomy Id: 1630
Other names: ATCC 27783, CCUG 32236, CIP 103154, DSM 20405, K. vitulina, LMG 18931, LMG:18931, Lactobacillus vitulinus, NRRL B-14854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.