Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI57168.1 | SEI96754.1 | SAMN05216514_101110 | SAMN05216514_1074 | Preprotein translocase subunit SecY. | Ig-like domain (group 2). | 0.638 |
SEI57168.1 | SEJ35867.1 | SAMN05216514_101110 | SAMN05216514_1312 | Preprotein translocase subunit SecY. | Hypothetical protein. | 0.571 |
SEI57168.1 | rplP | SAMN05216514_101110 | SAMN05216514_104122 | Preprotein translocase subunit SecY. | Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.967 |
SEI67601.1 | SEI74693.1 | SAMN05216514_102110 | SAMN05216514_10329 | Hypothetical protein. | DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.907 |
SEI67601.1 | SEI96754.1 | SAMN05216514_102110 | SAMN05216514_1074 | Hypothetical protein. | Ig-like domain (group 2). | 0.831 |
SEI67601.1 | SEJ35867.1 | SAMN05216514_102110 | SAMN05216514_1312 | Hypothetical protein. | Hypothetical protein. | 0.906 |
SEI74693.1 | SEI67601.1 | SAMN05216514_10329 | SAMN05216514_102110 | DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Hypothetical protein. | 0.907 |
SEI74693.1 | SEJ35867.1 | SAMN05216514_10329 | SAMN05216514_1312 | DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Hypothetical protein. | 0.608 |
SEI96754.1 | SEI57168.1 | SAMN05216514_1074 | SAMN05216514_101110 | Ig-like domain (group 2). | Preprotein translocase subunit SecY. | 0.638 |
SEI96754.1 | SEI67601.1 | SAMN05216514_1074 | SAMN05216514_102110 | Ig-like domain (group 2). | Hypothetical protein. | 0.831 |
SEI96754.1 | SEJ35867.1 | SAMN05216514_1074 | SAMN05216514_1312 | Ig-like domain (group 2). | Hypothetical protein. | 0.947 |
SEI96754.1 | secY | SAMN05216514_1074 | SAMN05216514_104135 | Ig-like domain (group 2). | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.638 |
SEJ35867.1 | SEI57168.1 | SAMN05216514_1312 | SAMN05216514_101110 | Hypothetical protein. | Preprotein translocase subunit SecY. | 0.571 |
SEJ35867.1 | SEI67601.1 | SAMN05216514_1312 | SAMN05216514_102110 | Hypothetical protein. | Hypothetical protein. | 0.906 |
SEJ35867.1 | SEI74693.1 | SAMN05216514_1312 | SAMN05216514_10329 | Hypothetical protein. | DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.608 |
SEJ35867.1 | SEI96754.1 | SAMN05216514_1312 | SAMN05216514_1074 | Hypothetical protein. | Ig-like domain (group 2). | 0.947 |
SEJ35867.1 | SEJ35895.1 | SAMN05216514_1312 | SAMN05216514_1313 | Hypothetical protein. | ATP-binding cassette, subfamily B. | 0.802 |
SEJ35867.1 | SEJ35920.1 | SAMN05216514_1312 | SAMN05216514_1314 | Hypothetical protein. | FtsX-like permease family protein. | 0.773 |
SEJ35867.1 | SEJ35948.1 | SAMN05216514_1312 | SAMN05216514_1315 | Hypothetical protein. | FtsX-like permease family protein. | 0.773 |
SEJ35867.1 | SEJ35973.1 | SAMN05216514_1312 | SAMN05216514_1316 | Hypothetical protein. | Putative ABC transport system ATP-binding protein. | 0.773 |
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