STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0031Putative membrane-associated metalloprotease; COG1266. (200 aa)    
Predicted Functional Partners:
CL1_0032
Hypothetical protein; COG3503.
  
    0.766
CL1_0030
Putative peptidyl-prolyl cis-trans isomerase, FKBP-type 1; COG1047.
       0.731
cysS
cysteinyl-tRNA synthetase; COG0215.
  
    0.549
CL1_1160
ABC type transporter permease 1; COG0842.
  
  
 0.497
CL1_1677
ABC type multidrug transporter permease; COG0842.
  
  
 0.497
CL1_1303
Hypothetical protein.
  
     0.480
CL1_1591
Hypothetical protein.
  
     0.451
CL1_1893
Hypothetical protein containing Peptidase_M54 domain; COG1913.
 
     0.428
CL1_1875
Hypothetical protein containing Phosphatidic acid phosphatase type 2 domain; COG0671.
 
    0.416
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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