STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0049Glycosyl transferase family 2 protein 1; COG1215. (349 aa)    
Predicted Functional Partners:
CL1_0048
Hypothetical protein; COG2388.
  
    0.768
CL1_0273
Putative glycoside hydrolase/deacetylase; COG0726.
 
  
 0.744
tgtA
7-cyano-7-deazaguanine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
   
 
 0.700
CL1_0748
Glycosyl transferase family 2 protein 2; COG0463.
 
  
0.624
CL1_0050
Sodium/phosphate symporter; COG0306.
       0.603
CL1_1475
Glucose-1-phosphate thymidylyltransferase-like protein; COG1213; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.603
CL1_0993
Putative glycosyl transferase, family 2 protein 1; COG0463.
 
  
 0.571
CL1_0047
ATPase, MinD family 1; COG0467.
 
     0.561
CL1_1342
Hypothetical protein containing HAD-like domain 7; COG0463.
 
  
 0.550
CL1_0034
Hypothetical protein; COG1028.
  
 
 0.528
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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