STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0073Permease, Auxin efflux carrier protein-like protein; COG0679. (293 aa)    
Predicted Functional Partners:
CL1_0072
Deblocking aminopeptidase, peptidase M42 family; COG1363.
     
 0.713
CL1_0074
Multidrug efflux transporter protein AcrB; COG2409.
       0.673
CL1_1264
NADP-dependent malic enzyme; COG0281.
  
  
 0.600
CL1_1345
Hypothetical protein containing peptidase M48 domain; COG0501.
  
  
 0.600
htpX
Putative heat shock protein HtpX 1; COG0501; Belongs to the peptidase M48B family.
  
  
 0.600
htpX-2
Putative heat shock protein HtpX 2; COG0501; Belongs to the peptidase M48B family.
  
  
 0.600
hisI
Hypothetical protein; COG0139; In the N-terminal section; belongs to the PRA-CH family.
  
    0.463
CL1_0075
Transcription regulator, ParR family; COG1695.
       0.424
CL1_1898
Amino acid transporter; COG0531.
  
  
 0.420
CL1_1084
Phosphopantetheine adenylyltransferase; COG1019.
  
  
 0.404
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.