Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CL1_0152Hypothetical protein. (267 aa)    
Predicted Functional Partners:
CL1_0153
Endoribonuclease L-PSP, YjgF-like protein; COG0251.
       0.833
CL1_0154
Metalloprotease containing JAB1/MPN domain; COG1310.
       0.814
CL1_0155
Transcription regulator, ArsR family 2; COG0640.
       0.714
CL1_0151
Putative ATP-dependent protease Lon; COG1067; Belongs to the peptidase S16 family.
       0.640
CL1_0156
Putative NTP pyrophosphohydrolase MazG-related, YpjD type; COG1694.
       0.633
CL1_0157
Putative transcription regulator, AsnC family 1; COG1522.
       0.603
CL1_0149
ABC-type transport involved in Fe -S cluster assembly, permease component; COG0719.
       0.415
CL1_0150
ABC-type transport involved in Fe -S cluster assembly, ATPase component; COG0396.
       0.415
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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