STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0183Putative UDP-N-acetyl-D-mannosaminuronate dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (428 aa)    
Predicted Functional Partners:
CL1_0184
Putative UDP-N-acetylglucosamine 2-epimerase; COG0381.
 
 
 0.996
CL1_0830
UDP-n-acetylglucosamine 2-epimerase; COG0381.
 
  
 0.727
CL1_0825
Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT); COG0399; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.633
CL1_0182
Hypothetical protein; COG1817.
 
   
 0.624
CL1_1795
UDP-glucose 4-epimerase; COG0451.
  
 0.463
CL1_0841
Putative UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase; COG0451.
 
  
 0.456
CL1_0826
Hypothetical protein containing oxidoreductase-domain; COG0673.
  
  
 0.437
CL1_1341
Glycosyl transferase family 4 protein; COG0472.
  
  
 0.436
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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