STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0191Putative monovalent cation/H+ antiporter 1 subunit F; COG2212. (84 aa)    
Predicted Functional Partners:
CL1_0192
Putative monovalent cation/H+ antiporter 1 subunit G; COG1320.
 
 
 0.984
CL1_0190
Putative monovalent cation/H+ antiporter 1 subunit E; COG1863.
 
 
 0.977
CL1_0194
Putative monovalent cation/H+ antiporter 1 subunit B; COG2111.
 
 
 0.959
CL1_0195
Putative monovalent cation/H+ antiporter 1 subunit C; COG1006.
  
 
 0.957
CL1_0196
NADH dehydrogenase subunit N; COG0651.
  
 
 0.952
CL1_0197
NADH dehydrogenase subunit M; COG0651.
  
 
 0.952
CL1_1142
Putative monovalent cation/H+ antiporter 2 subunit E; COG1863.
 
 
 0.936
CL1_0193
Hypothetical protein; COG1563.
 
 
 
 0.927
CL1_1435
Putative monovalent cation/H+ antiporter 3 subunit E; COG1863.
 
 
 0.923
CL1_0198
NADH dehydrogenase subunit H; COG0650.
   
   0.902
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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