CL1_0216 protein (Thermococcus cleftensis) - STRING interaction network

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CL1_0216

Putative phospholipid-binding protein, PBP family; COG1881. (155 aa)

Predicted Functional Partners:

rps10

0.815

rpl3

0.810

rpl2

0.808

CL1_0217

0.807

rpl15

0.804

CL1_0220

0.801

rps5

0.801

rpl13

0.800

rpl22

0.797

rps2

0.796

Your Current Organism:

Thermococcus cleftensis

NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CL1_0216	CL1_0217	CL1_0216	CL1_0217	Putative phospholipid-binding protein, PBP family; COG1881.	Hypothetical protein; COG5423.	0.807
CL1_0216	CL1_0220	CL1_0216	CL1_0220	Putative phospholipid-binding protein, PBP family; COG1881.	Hypothetical protein; COG0223.	0.801
CL1_0216	rpl13	CL1_0216	CL1_0591	Putative phospholipid-binding protein, PBP family; COG1881.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.800
CL1_0216	rpl15	CL1_0216	CL1_0605	Putative phospholipid-binding protein, PBP family; COG1881.	50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.804
CL1_0216	rpl2	CL1_0216	CL1_0625	Putative phospholipid-binding protein, PBP family; COG1881.	50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.808
CL1_0216	rpl22	CL1_0216	CL1_0623	Putative phospholipid-binding protein, PBP family; COG1881.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.797
CL1_0216	rpl3	CL1_0216	CL1_0628	Putative phospholipid-binding protein, PBP family; COG1881.	50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.810
CL1_0216	rps10	CL1_0216	CL1_1932	Putative phospholipid-binding protein, PBP family; COG1881.	30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.815
CL1_0216	rps2	CL1_0216	CL1_0586	Putative phospholipid-binding protein, PBP family; COG1881.	30S ribosomal protein S2; COG0052; Belongs to the universal ribosomal protein uS2 family.	0.796
CL1_0216	rps5	CL1_0216	CL1_0607	Putative phospholipid-binding protein, PBP family; COG1881.	30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.	0.801
CL1_0217	CL1_0216	CL1_0217	CL1_0216	Hypothetical protein; COG5423.	Putative phospholipid-binding protein, PBP family; COG1881.	0.807
CL1_0217	CL1_0220	CL1_0217	CL1_0220	Hypothetical protein; COG5423.	Hypothetical protein; COG0223.	0.911
CL1_0220	CL1_0216	CL1_0220	CL1_0216	Hypothetical protein; COG0223.	Putative phospholipid-binding protein, PBP family; COG1881.	0.801
CL1_0220	CL1_0217	CL1_0220	CL1_0217	Hypothetical protein; COG0223.	Hypothetical protein; COG5423.	0.911
rpl13	CL1_0216	CL1_0591	CL1_0216	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative phospholipid-binding protein, PBP family; COG1881.	0.800
rpl13	rpl15	CL1_0591	CL1_0605	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rpl13	rpl2	CL1_0591	CL1_0625	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.997
rpl13	rpl22	CL1_0591	CL1_0623	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.998
rpl13	rpl3	CL1_0591	CL1_0628	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.998
rpl13	rps10	CL1_0591	CL1_1932	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.997