CL1_0265 protein (Thermococcus cleftensis) - STRING interaction network

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Score

CL1_0265

Hypothetical protein; COG0517. (164 aa)

Predicted Functional Partners:

CL1_0266

0.917

rps2

0.503

rps4

0.491

rpl3

0.489

rps13

0.483

rpl13

0.475

rpl2

0.473

rpl7ae

0.470

rps3

0.469

rps9

0.468

Your Current Organism:

Thermococcus cleftensis

NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CL1_0265	CL1_0266	CL1_0265	CL1_0266	Hypothetical protein; COG0517.	Sodium/hydrogen antiporter, NapA-type; COG0475.	0.917
CL1_0265	rpl13	CL1_0265	CL1_0591	Hypothetical protein; COG0517.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.475
CL1_0265	rpl2	CL1_0265	CL1_0625	Hypothetical protein; COG0517.	50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.473
CL1_0265	rpl3	CL1_0265	CL1_0628	Hypothetical protein; COG0517.	50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.489
CL1_0265	rpl7ae	CL1_0265	CL1_1741	Hypothetical protein; COG0517.	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.470
CL1_0265	rps13	CL1_0265	CL1_0596	Hypothetical protein; COG0517.	30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.483
CL1_0265	rps2	CL1_0265	CL1_0586	Hypothetical protein; COG0517.	30S ribosomal protein S2; COG0052; Belongs to the universal ribosomal protein uS2 family.	0.503
CL1_0265	rps3	CL1_0265	CL1_0622	Hypothetical protein; COG0517.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.469
CL1_0265	rps4	CL1_0265	CL1_0595	Hypothetical protein; COG0517.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.491
CL1_0265	rps9	CL1_0265	CL1_0590	Hypothetical protein; COG0517.	30S ribosomal protein S9; COG0103; Belongs to the universal ribosomal protein uS9 family.	0.468
CL1_0266	CL1_0265	CL1_0266	CL1_0265	Sodium/hydrogen antiporter, NapA-type; COG0475.	Hypothetical protein; COG0517.	0.917
rpl13	CL1_0265	CL1_0591	CL1_0265	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; COG0517.	0.475
rpl13	rpl2	CL1_0591	CL1_0625	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.997
rpl13	rpl3	CL1_0591	CL1_0628	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.998
rpl13	rpl7ae	CL1_0591	CL1_1741	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.997
rpl13	rps13	CL1_0591	CL1_0596	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.999
rpl13	rps2	CL1_0591	CL1_0586	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S2; COG0052; Belongs to the universal ribosomal protein uS2 family.	0.999
rpl13	rps3	CL1_0591	CL1_0622	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.997
rpl13	rps4	CL1_0591	CL1_0595	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpl13	rps9	CL1_0591	CL1_0590	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; COG0103; Belongs to the universal ribosomal protein uS9 family.	0.999