STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0412Alpha-glucan phosphorylase; COG0058. (830 aa)    
Predicted Functional Partners:
CL1_0882
Glycogen synthase; COG0297.
 
  
 0.980
CL1_0091
Pullulanase type II; COG0366.
 
 0.954
CL1_0546
Glycogen branching enzyme; COG1543; Belongs to the glycosyl hydrolase 57 family.
 
  
 0.953
CL1_0884
Cyclomaltodextrinase; COG0366.
 
 0.949
CL1_0467
Putative phospho-sugar mutase; COG1109.
 
 
 0.942
CL1_0254
Ornithine carbamoyltransferase; COG0078; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.933
CL1_0972
4-alpha-Glucanotransferase; COG1449.
 
 
 0.931
CL1_1040
Cytoplasmic alpha-amylase; COG0366.
     
  0.900
pckG
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
     
 0.731
gap
Putative glyceraldehyde-3-phosphate dehydrogenase; COG0057.
  
 
 0.694
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.