STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0415Phospho-sugar mutase-like protein; COG1109. (237 aa)    
Predicted Functional Partners:
CL1_0414
Putative mannose-1-phosphate guanylyltransferase; COG1208.
  
  
 0.853
CL1_0507
Glycosyl transferase family protein 6; COG1807.
 
  
 0.720
CL1_0366
Putative arginase; COG0010; Belongs to the arginase family.
 
  
 0.681
pckG
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
     
 0.666
tmk
Thymidylate kinase; COG0125.
     
 0.661
CL1_0147
Hydrogenase-specific maturation endopeptidase; COG0680.
 
     0.638
CL1_1256
Hypothetical protein; COG0457.
 
   
 0.637
CL1_1342
Hypothetical protein containing HAD-like domain 7; COG0463.
  
 
 0.635
CL1_1211
Hypothetical protein; COG1549.
  
     0.616
CL1_1904
Oligosaccharyl transferase, STT3 subunit; COG1287.
 
     0.611
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.