STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0492Putative cysteine desulfurase; COG0520. (399 aa)    
Predicted Functional Partners:
CL1_0149
ABC-type transport involved in Fe -S cluster assembly, permease component; COG0719.
 
 
 0.992
CL1_0150
ABC-type transport involved in Fe -S cluster assembly, ATPase component; COG0396.
 
  
 0.992
CL1_1123
Thioredoxin reductase; COG0492.
  
 
 0.912
CL1_1996
Putative pyridine nucleotide-disulfide oxidoreductase; COG0492.
  
 
 0.912
CL1_0491
Hypothetical protein.
       0.818
CL1_1353
Hypothetical protein; COG2151.
 
  
 0.716
CL1_0490
Hydrogenase expression/formation protein HypE 2; COG0309.
       0.554
CL1_0488
Hypothetical protein; COG1708.
       0.510
CL1_0489
Hypothetical protein; COG1895.
       0.510
moaA
Molybdenum cofactor biosynthesis protein A2; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
   
 
 0.485
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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