Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CL1_0546Glycogen branching enzyme; COG1543; Belongs to the glycosyl hydrolase 57 family. (663 aa)    
Predicted Functional Partners:
CL1_0972
4-alpha-Glucanotransferase; COG1449.
 
  
 0.955
CL1_0412
Alpha-glucan phosphorylase; COG0058.
 
  
 0.941
CL1_0882
Glycogen synthase; COG0297.
 
  0.936
CL1_0091
Pullulanase type II; COG0366.
 
  
 0.923
CL1_0884
Cyclomaltodextrinase; COG0366.
    
 0.910
CL1_1275
Cyclomaltodextrin glucanotransferase; COG0366.
    
 0.910
CL1_1040
Cytoplasmic alpha-amylase; COG0366.
     
  0.900
CL1_1421
Glycosyl transferase family 1 protein; COG0438.
  
 0.883
CL1_0545
Nitrogen regulatory protein P-II (glnB); COG0347; Belongs to the P(II) protein family.
  
    0.851
CL1_0547
Hypothetical protein containing fibronectin-binding protein; COG1293.
       0.833
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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