rpl5 protein (Thermococcus cleftensis) - STRING interaction network

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rpl5

50S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (183 aa)

Predicted Functional Partners:

rpl21e

0.999

rpl30e

0.999

rpl40e

0.999

rpl13

0.999

rps11

0.999

rpl14e

0.999

rpl34e

0.999

rpl15

0.999

rpl30

0.999

rps5

0.999

Your Current Organism:

Thermococcus cleftensis

NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl13	rpl14e	CL1_0591	CL1_0599	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	0.997
rpl13	rpl15	CL1_0591	CL1_0605	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rpl13	rpl21e	CL1_0591	CL1_0283	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21e; COG2139; Belongs to the eukaryotic ribosomal protein eL21 family.	0.998
rpl13	rpl30	CL1_0591	CL1_0606	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L30; COG1841.	0.999
rpl13	rpl30e	CL1_0591	CL1_0443	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L30e; COG1911; Belongs to the eukaryotic ribosomal protein eL30 family.	0.998
rpl13	rpl34e	CL1_0591	CL1_0601	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L34Ae; COG2174; Belongs to the eukaryotic ribosomal protein eL34 family.	0.996
rpl13	rpl40e	CL1_0591	CL1_0585	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L40e; COG1552; Belongs to the eukaryotic ribosomal protein eL40 family.	0.999
rpl13	rpl5	CL1_0591	CL1_0614	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.999
rpl13	rps11	CL1_0591	CL1_0594	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.	0.999
rpl13	rps5	CL1_0591	CL1_0607	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.	0.998
rpl14e	rpl13	CL1_0599	CL1_0591	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rpl14e	rpl15	CL1_0599	CL1_0605	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rpl14e	rpl21e	CL1_0599	CL1_0283	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L21e; COG2139; Belongs to the eukaryotic ribosomal protein eL21 family.	0.999
rpl14e	rpl30	CL1_0599	CL1_0606	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L30; COG1841.	0.999
rpl14e	rpl30e	CL1_0599	CL1_0443	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L30e; COG1911; Belongs to the eukaryotic ribosomal protein eL30 family.	0.999
rpl14e	rpl34e	CL1_0599	CL1_0601	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L34Ae; COG2174; Belongs to the eukaryotic ribosomal protein eL34 family.	0.999
rpl14e	rpl40e	CL1_0599	CL1_0585	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L40e; COG1552; Belongs to the eukaryotic ribosomal protein eL40 family.	0.998
rpl14e	rpl5	CL1_0599	CL1_0614	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	50S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.999
rpl14e	rps11	CL1_0599	CL1_0594	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	30S ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.	0.996
rpl14e	rps5	CL1_0599	CL1_0607	50S ribosomal protein L14e; COG2163; Belongs to the eukaryotic ribosomal protein eL14 family.	30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.	0.999

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