CL1_0620 protein (Thermococcus cleftensis) - STRING interaction network

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Score

CL1_0620

Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family. (88 aa)

Predicted Functional Partners:

rps3

0.989

rps19p

0.984

rps17

0.977

rps4e

0.970

rps8

0.966

rps14

0.966

rps5

0.961

rpl29

0.961

eif1a

0.923

rpl23

0.920

Your Current Organism:

Thermococcus cleftensis

NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CL1_0620	eif1a	CL1_0620	CL1_1913	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.923
CL1_0620	rpl23	CL1_0620	CL1_0626	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.920
CL1_0620	rpl29	CL1_0620	CL1_0621	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	50S ribosomal protein L29P; COG0255; Belongs to the universal ribosomal protein uL29 family.	0.961
CL1_0620	rps14	CL1_0620	CL1_0613	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.	0.966
CL1_0620	rps17	CL1_0620	CL1_0618	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.977
CL1_0620	rps19p	CL1_0620	CL1_0624	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.984
CL1_0620	rps3	CL1_0620	CL1_0622	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.989
CL1_0620	rps4e	CL1_0620	CL1_0615	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S4e; COG1471; Belongs to the eukaryotic ribosomal protein eS4 family.	0.970
CL1_0620	rps5	CL1_0620	CL1_0607	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.	0.961
CL1_0620	rps8	CL1_0620	CL1_0612	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	30S ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.966
eif1a	CL1_0620	CL1_1913	CL1_0620	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Translation initiation factor Sui1; COG0023; Belongs to the SUI1 family.	0.923
eif1a	rpl23	CL1_1913	CL1_0626	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.970
eif1a	rpl29	CL1_1913	CL1_0621	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	50S ribosomal protein L29P; COG0255; Belongs to the universal ribosomal protein uL29 family.	0.976
eif1a	rps14	CL1_1913	CL1_0613	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.	0.984
eif1a	rps17	CL1_1913	CL1_0618	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.980
eif1a	rps19p	CL1_1913	CL1_0624	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.992
eif1a	rps3	CL1_1913	CL1_0622	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.981
eif1a	rps4e	CL1_1913	CL1_0615	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S4e; COG1471; Belongs to the eukaryotic ribosomal protein eS4 family.	0.938
eif1a	rps5	CL1_1913	CL1_0607	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.	0.984
eif1a	rps8	CL1_1913	CL1_0612	Translation initiation factor IF-1; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	30S ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.985