STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CL1_0679Indolepyruvate ferredoxin oxidoreductase, alpha subunit 1; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (635 aa)    
Predicted Functional Partners:
CL1_1414
Indolepyruvate ferredoxin oxidoreductase, beta subunit 2; COG1014.
 
 0.933
CL1_1330
Indolepyruvate ferredoxin oxidoreductase, beta subunit 1; COG1014.
 
 
 0.839
CL1_0638
Glutamate synthase beta chain-related oxidoreductase containing 2Fe-2S and 4Fe-4S clusters; COG0493.
  
 
 0.837
CL1_0678
Hypothetical protein.
       0.803
CL1_0677
Hypothetical protein; COG4031.
       0.763
CL1_0451
Putative aminotransferase 2; COG0436.
     
 0.715
CL1_0640
NADH-quinone oxidoreductase subunit E; COG1905.
   
 
 0.693
CL1_0010
2-oxoglutarate ferredoxin oxidoreductase subunit gamma 2; COG1014.
 
 
 0.490
CL1_1840
Superoxide reductase-like protein; COG2033.
  
  
 0.469
CL1_1144
Putative glutamate synthase subunit beta; COG0493.
   
 
 0.468
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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