STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0737Hypothetical protein; COG3863. (204 aa)    
Predicted Functional Partners:
CL1_0738
Hypothetical protein; COG0393; Belongs to the UPF0145 family.
       0.588
CL1_0739
Hypothetical protein.
       0.577
CL1_0740
Puativie transcriptional regulator, PadR family; COG1695.
       0.556
CL1_0741
Hypothetical protein; COG5658.
       0.548
CL1_0736
Hypothetical protein; COG3863.
      
0.514
CL1_0850
Glycoside hydrolase family 57 protein; COG0366.
  
     0.487
CL1_0159
Putative RNA-binding protein containing THUMP domain; COG1818.
  
     0.461
CL1_1256
Hypothetical protein; COG0457.
  
    0.449
CL1_0754
Signal peptidase I, S26B family; COG0681.
 
     0.436
CL1_0735
Diphthamide synthesis protein; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family.
       0.420
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.