Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CL1_0747Putative aminopeptidase 2; COG2234. (562 aa)    
Predicted Functional Partners:
CL1_0748
Glycosyl transferase family 2 protein 2; COG0463.
       0.762
CL1_0366
Putative arginase; COG0010; Belongs to the arginase family.
 
 
 0.491
CL1_1964
Hypothetical protein; COG1672.
  
     0.465
CL1_0507
Glycosyl transferase family protein 6; COG1807.
 
     0.464
CL1_0415
Phospho-sugar mutase-like protein; COG1109.
 
     0.456
CL1_1815
CRISPR-associated protein Cas5; COG1688.
  
     0.456
CL1_1898
Amino acid transporter; COG0531.
     
 0.420
CL1_0172
Glycosyl transferase family protein 5; COG5305.
  
     0.405
hisI
Hypothetical protein; COG0139; In the N-terminal section; belongs to the PRA-CH family.
     
 0.402
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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