STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0831Hypothetical protein. (405 aa)    
Predicted Functional Partners:
CL1_0829
Hypothetical protein; COG1817.
 
     0.859
CL1_0833
Hypothetical protein; COG0697.
 
     0.848
CL1_0828
Glycosyl transferase family protein 7; COG0463.
 
     0.825
CL1_0830
UDP-n-acetylglucosamine 2-epimerase; COG0381.
 
     0.825
CL1_0826
Hypothetical protein containing oxidoreductase-domain; COG0673.
       0.797
CL1_0824
Hypothetical protein containing Trimeric LpxA-like domain; COG0110.
       0.784
CL1_0834
Glycosyl transferase family protein 8; COG0438.
     
 0.784
CL1_0836
Hypothetical protein.
     
 0.774
CL1_0832
Hypothetical protein.
       0.773
CL1_0827
NDP-sugar dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.771
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.