STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0838Polysaccharide biosynthesis-like protein; COG2244. (509 aa)    
Predicted Functional Partners:
CL1_0840
Sugar-phosphate nucleotidyltransferase 2; COG1208.
 
  
 0.639
CL1_0184
Putative UDP-N-acetylglucosamine 2-epimerase; COG0381.
  
  
 0.586
CL1_0830
UDP-n-acetylglucosamine 2-epimerase; COG0381.
  
  
 0.586
CL1_0841
Putative UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase; COG0451.
 
  
 0.572
CL1_1475
Glucose-1-phosphate thymidylyltransferase-like protein; COG1213; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.552
CL1_0839
Putative oligosaccharyl transferase, STT3 subunit 1; COG1287.
     
 0.544
CL1_0748
Glycosyl transferase family 2 protein 2; COG0463.
  
  
 0.533
CL1_0827
NDP-sugar dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.508
CL1_1342
Hypothetical protein containing HAD-like domain 7; COG0463.
 
  
 0.461
CL1_0825
Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT); COG0399; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.446
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.