STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CL1_0841Putative UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase; COG0451. (319 aa)    
Predicted Functional Partners:
CL1_0840
Sugar-phosphate nucleotidyltransferase 2; COG1208.
 
 0.982
CL1_1795
UDP-glucose 4-epimerase; COG0451.
 
  
 
0.916
CL1_0291
Sugar-phosphate nucleotidyltransferase 1; COG1208.
 
 0.903
CL1_0109
Putative sugar-phosphate nucleotidyltransferase; COG1208.
 
 0.895
CL1_0414
Putative mannose-1-phosphate guanylyltransferase; COG1208.
 
 0.894
rps12
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
  
 0.855
rps14
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.
 
 0.853
rps24e
30S ribosomal protein S24e; COG2004; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.852
CL1_0469
Bifunctional mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase; COG0836; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.846
rps3
30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.845
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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