STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0857Glycosyl transferase family protein 3; COG0463. (372 aa)    
Predicted Functional Partners:
CL1_0858
Lps biosynthesis rfbU-like protein; COG0438.
 
  
 0.916
CL1_0856
Glycosyl transferase family protein 2; COG0438.
 
  
 0.867
CL1_0859
Putative oligosaccharyl transferase, STT3 subunit 2; COG1287.
  
 
 0.615
CL1_0841
Putative UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase; COG0451.
 
  
 0.539
CL1_1795
UDP-glucose 4-epimerase; COG0451.
 
  
 0.468
CL1_0748
Glycosyl transferase family 2 protein 2; COG0463.
 
  
0.435
CL1_0860
Hypothetical protein; COG0647.
       0.427
CL1_0990
Putative polysaccharide biosynthesis protein; COG2244.
 
  
 0.425
CL1_0861
Hypothetical protein; COG1201.
       0.421
CL1_0993
Putative glycosyl transferase, family 2 protein 1; COG0463.
 
  
 0.412
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.