STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0885Maltooligosaccharide transport system substrate-binding protein; COG2182. (440 aa)    
Predicted Functional Partners:
CL1_0886
Maltooligosaccharide transport system permease protein 1; COG1175.
 0.999
CL1_0887
Maltooligosaccharide transport system permease protein 2; COG3833.
 
 0.999
CL1_0889
Maltooligosaccharide transport system ATP-binding protein; COG3839.
 
  
  0.963
CL1_0884
Cyclomaltodextrinase; COG0366.
 
  
 0.952
CL1_0888
Amylopullulanase; COG1449.
 
   
 0.889
CL1_0891
Phosphopentomutase; COG1109; Belongs to the phosphohexose mutase family.
     
 0.819
CL1_0890
Hypothetical protein; COG1255; Belongs to the UPF0146 family.
       0.818
CL1_0882
Glycogen synthase; COG0297.
 
     0.797
CL1_0883
Putative transcription regulator, TrmB family; COG1378.
     
 0.795
CL1_1275
Cyclomaltodextrin glucanotransferase; COG0366.
 
  
 0.761
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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