STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0937Trk-type pottasium transport system, NAD-binding component; COG0569. (230 aa)    
Predicted Functional Partners:
CL1_0295
Putative potassium uptake protein; COG0168.
 
 
 0.999
CL1_1898
Amino acid transporter; COG0531.
  
  
 0.862
secD
Putative preprotein translocase subunit SecD; Involved in protein export.
 
    0.846
secF
Putative preprotein translocase subunit SecF; Involved in protein export.
       0.818
CL1_1720
Putative Serine/threonine protein phosphatase; COG0631.
  
  
 0.733
CL1_1102
Molybdopterin converting factor subunit 2; COG0314.
  
    0.716
CL1_0934
V-type ATP synthase subunit K; COG0636.
 
   
 0.653
CL1_0935
V-type ATP synthase subunit I; COG1269; Belongs to the V-ATPase 116 kDa subunit family.
     
 0.594
CL1_0936
V-type ATP synthase subunit H.
       0.593
CL1_0638
Glutamate synthase beta chain-related oxidoreductase containing 2Fe-2S and 4Fe-4S clusters; COG0493.
     
 0.592
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.