STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CL1_09724-alpha-Glucanotransferase; COG1449. (652 aa)    
Predicted Functional Partners:
CL1_0546
Glycogen branching enzyme; COG1543; Belongs to the glycosyl hydrolase 57 family.
 
  
 0.955
CL1_1275
Cyclomaltodextrin glucanotransferase; COG0366.
    
 0.939
CL1_0882
Glycogen synthase; COG0297.
 
 
 0.931
CL1_0412
Alpha-glucan phosphorylase; COG0058.
 
 
 0.929
CL1_0091
Pullulanase type II; COG0366.
    
 0.911
CL1_0884
Cyclomaltodextrinase; COG0366.
    
 0.911
CL1_0467
Putative phospho-sugar mutase; COG1109.
    
 0.903
CL1_1040
Cytoplasmic alpha-amylase; COG0366.
     
  0.900
CL1_0973
Hypothetical protein containing CBD9-like domain.
     
 0.671
CL1_0974
Hypothetical protein; COG0170.
       0.658
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.