STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_0981Hypothetical protein; COG3609. (75 aa)    
Predicted Functional Partners:
CL1_0985
Hypothetical protein; COG3379.
 
   
 0.959
sat
Sulfate adenylyltransferase; COG2046; Belongs to the sulfate adenylyltransferase family.
 
   
 0.950
CL1_0984
Hypothetical protein; COG0608.
     
 0.899
cysC
Putative adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     
 0.879
CL1_0989
Hypothetical protein; COG0730.
 
     0.755
CL1_0990
Putative polysaccharide biosynthesis protein; COG2244.
 
     0.678
CL1_0987
Hypothetical protein; COG5428.
       0.660
CL1_0986
Hypothetical protein; COG0438.
       0.613
CL1_0983
Hypothetical protein; COG2880.
       0.554
CL1_1362
Putative transcriptional regulator; COG1709.
  
   
 0.517
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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