Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CL1_1075Hypothetical protein; COG0595. (517 aa)    
Predicted Functional Partners:
rnj
Hypothetical protein containing metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily.
  
  
0.912
CL1_1076
Hypothetical protein; COG2105.
       0.773
CL1_1074
Hypothetical protein.
       0.598
CL1_0563
Bifunctional short chain isoprenyl diphosphate synthase; COG0142; Belongs to the FPP/GGPP synthase family.
  
    0.575
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA.
   
    0.447
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
  
 0.426
CL1_0162
recJ-like single-stranded DNA exonuclease; COG0608.
 
   
 0.424
CL1_1647
Bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; COG0483.
  
  
 0.419
CL1_1073
Hypothetical protein; COG1673; Belongs to the UPF0310 family.
       0.409
CL1_1039
Putative transcription regulator, ArsR family; COG0640.
 
     0.406
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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