STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1095Hypothetical protein; COG1361. (791 aa)    
Predicted Functional Partners:
CL1_1096
Hypothetical protein; COG1033.
 
    0.875
CL1_1092
Nol1-nop2-sun family nucleolar protein III; COG0144; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.732
CL1_1097
Putative transcription regulator, MarR family 2; COG1510; Belongs to the GbsR family.
 
     0.696
CL1_1094
Hypothetical protein; COG5608.
       0.695
CL1_1091
Hypothetical protein; COG0392.
 
     0.662
CL1_1692
Hypothetical protein; COG1967.
  
     0.637
CL1_0839
Putative oligosaccharyl transferase, STT3 subunit 1; COG1287.
  
     0.636
CL1_0602
Hypothetical protein; COG1422.
  
     0.617
CL1_0507
Glycosyl transferase family protein 6; COG1807.
  
     0.592
CL1_1418
Hypothetical protein; COG2247.
  
     0.589
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.