STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1129Hypothetical protein; COG1143. (142 aa)    
Predicted Functional Partners:
CL1_1130
NADH:ubiquinone oxidoreductase, subunit 1; COG0650.
 
 
 0.975
CL1_1133
NADH-ubiquinone oxidoreductase subunit 4; COG3260.
 
 
 0.975
CL1_1131
NADH-ubiquinone oxidoreductase subunit 2; COG3261.
 
 
 0.965
CL1_1132
NADH-ubiquinone oxidoreductase subunit 3; COG3262.
 
 
   0.954
CL1_0199
NADH dehydrogenase subunit B; COG0377; Belongs to the complex I 20 kDa subunit family.
 
 0.946
CL1_0201
NADH dehydrogenase subunit D; COG0649; Belongs to the complex I 49 kDa subunit family.
 
 0.936
CL1_0200
NADH dehydrogenase subunit C; COG0852.
 
 0.917
CL1_1137
Putative monovalent cation/H+ antiporter 2 subunit B; COG2111.
  
 
 0.884
CL1_1138
Hypothetical protein; COG2111.
  
 
 0.873
CL1_0639
NADH-quinone oxidoreductase subunit F; COG1894.
  
 0.862
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.